Mon Mar 23 12:09:02 PDT 2020 instance id: i-0fd4ed0f1471f8e2e hostname comet-121-10 lscpu Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 32 On-line CPU(s) list: 0-31 Thread(s) per core: 2 Core(s) per socket: 16 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 79 Model name: Intel(R) Xeon(R) CPU E5-2686 v4 @ 2.30GHz Stepping: 1 CPU MHz: 2699.523 CPU max MHz: 3000.0000 CPU min MHz: 1200.0000 BogoMIPS: 4600.16 Hypervisor vendor: Xen Virtualization type: full L1d cache: 32K L1i cache: 32K L2 cache: 256K L3 cache: 46080K NUMA node0 CPU(s): 0-31 Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm rdseed adx xsaveopt ----------------------- lstopo-no-graphics Machine (240GB) Package L#0 + L3 L#0 (45MB) L2 L#0 (256KB) + L1d L#0 (32KB) + L1i L#0 (32KB) + Core L#0 PU L#0 (P#0) PU L#1 (P#16) L2 L#1 (256KB) + L1d L#1 (32KB) + L1i L#1 (32KB) + Core L#1 PU L#2 (P#1) PU L#3 (P#17) L2 L#2 (256KB) + L1d L#2 (32KB) + L1i L#2 (32KB) + Core L#2 PU L#4 (P#2) PU L#5 (P#18) L2 L#3 (256KB) + L1d L#3 (32KB) + L1i L#3 (32KB) + Core L#3 PU L#6 (P#3) PU L#7 (P#19) L2 L#4 (256KB) + L1d L#4 (32KB) + L1i L#4 (32KB) + Core L#4 PU L#8 (P#4) PU L#9 (P#20) L2 L#5 (256KB) + L1d L#5 (32KB) + L1i L#5 (32KB) + Core L#5 PU L#10 (P#5) PU L#11 (P#21) L2 L#6 (256KB) + L1d L#6 (32KB) + L1i L#6 (32KB) + Core L#6 PU L#12 (P#6) PU L#13 (P#22) L2 L#7 (256KB) + L1d L#7 (32KB) + L1i L#7 (32KB) + Core L#7 PU L#14 (P#7) PU L#15 (P#23) L2 L#8 (256KB) + L1d L#8 (32KB) + L1i L#8 (32KB) + Core L#8 PU L#16 (P#8) PU L#17 (P#24) L2 L#9 (256KB) + L1d L#9 (32KB) + L1i L#9 (32KB) + Core L#9 PU L#18 (P#9) PU L#19 (P#25) L2 L#10 (256KB) + L1d L#10 (32KB) + L1i L#10 (32KB) + Core L#10 PU L#20 (P#10) PU L#21 (P#26) L2 L#11 (256KB) + L1d L#11 (32KB) + L1i L#11 (32KB) + Core L#11 PU L#22 (P#11) PU L#23 (P#27) L2 L#12 (256KB) + L1d L#12 (32KB) + L1i L#12 (32KB) + Core L#12 PU L#24 (P#12) PU L#25 (P#28) L2 L#13 (256KB) + L1d L#13 (32KB) + L1i L#13 (32KB) + Core L#13 PU L#26 (P#13) PU L#27 (P#29) L2 L#14 (256KB) + L1d L#14 (32KB) + L1i L#14 (32KB) + Core L#14 PU L#28 (P#14) PU L#29 (P#30) L2 L#15 (256KB) + L1d L#15 (32KB) + L1i L#15 (32KB) + Core L#15 PU L#30 (P#15) PU L#31 (P#31) HostBridge L#0 PCI 8086:7010 PCI 1013:00b8 GPU L#0 "card4" GPU L#1 "controlD68" PCI 1d0f:ec20 Net L#2 "ens3" PCI 10de:1db1 GPU L#3 "card0" GPU L#4 "renderD128" PCI 10de:1db1 GPU L#5 "card1" GPU L#6 "renderD129" PCI 10de:1db1 GPU L#7 "card2" GPU L#8 "renderD130" PCI 10de:1db1 GPU L#9 "card3" GPU L#10 "renderD131" ----------------------- nvidia-smi Mon Mar 23 12:09:04 2020 +-----------------------------------------------------------------------------+ | NVIDIA-SMI 418.87.00 Driver Version: 418.87.00 CUDA Version: 10.1 | |-------------------------------+----------------------+----------------------+ | GPU Name Persistence-M| Bus-Id Disp.A | Volatile Uncorr. ECC | | Fan Temp Perf Pwr:Usage/Cap| Memory-Usage | GPU-Util Compute M. | |===============================+======================+======================| | 0 Tesla V100-SXM2... On | 00000000:00:1B.0 Off | 0 | | N/A 31C P0 35W / 300W | 0MiB / 16130MiB | 0% Default | +-------------------------------+----------------------+----------------------+ | 1 Tesla V100-SXM2... On | 00000000:00:1C.0 Off | 0 | | N/A 30C P0 36W / 300W | 0MiB / 16130MiB | 0% Default | +-------------------------------+----------------------+----------------------+ | 2 Tesla V100-SXM2... On | 00000000:00:1D.0 Off | 0 | | N/A 30C P0 37W / 300W | 0MiB / 16130MiB | 0% Default | +-------------------------------+----------------------+----------------------+ | 3 Tesla V100-SXM2... On | 00000000:00:1E.0 Off | 0 | | N/A 30C P0 39W / 300W | 0MiB / 16130MiB | 0% Default | +-------------------------------+----------------------+----------------------+ +-----------------------------------------------------------------------------+ | Processes: GPU Memory | | GPU PID Type Process name Usage | |=============================================================================| | No running processes found | +-----------------------------------------------------------------------------+ ----------------------- singularity --version singularity version 3.2.1-1.1.el7 ----------------------- singularity buildcfg PACKAGE_NAME=singularity PACKAGE_VERSION=3.2.1-1.1.el7 BUILDDIR=/builddir/build/BUILD/singularity-3.2.1/gopath/src/github.com/sylabs/singularity/builddir PREFIX=/usr EXECPREFIX=/usr BINDIR=/usr/bin SBINDIR=/usr/sbin LIBEXECDIR=/usr/libexec DATAROOTDIR=/usr/share DATADIR=/usr/share SYSCONFDIR=/etc SHAREDSTATEDIR=/var/lib LOCALSTATEDIR=/var RUNSTATEDIR=/var/run INCLUDEDIR=/usr/include DOCDIR=/usr/share/doc/singularity INFODIR=/usr/share/info LIBDIR=/usr/lib64 LOCALEDIR=/usr/share/locale MANDIR=/usr/share/man SINGULARITY_CONFDIR=/etc/singularity SESSIONDIR=/var/singularity/mnt/session ----------------------- beagle info singularity exec --bind /projects --nv /projects/ps-ngbt/home/cipres/ngbw/aws/beast2-v2.6.1-gpu-20200206.simg beast -threads 4 -instances 4 -beagle_GPU -beagle_order 1,2,3,4 -beagle_scaling dynamic -beagle_info BEAST v2.6.1, 2002-2019 Bayesian Evolutionary Analysis Sampling Trees Designed and developed by Remco Bouckaert, Alexei J. Drummond, Andrew Rambaut & Marc A. Suchard Centre for Computational Evolution University of Auckland r.bouckaert@auckland.ac.nz alexei@cs.auckland.ac.nz Institute of Evolutionary Biology University of Edinburgh a.rambaut@ed.ac.uk David Geffen School of Medicine University of California, Los Angeles msuchard@ucla.edu Downloads, Help & Resources: http://beast2.org/ Source code distributed under the GNU Lesser General Public License: http://github.com/CompEvol/beast2 BEAST developers: Alex Alekseyenko, Trevor Bedford, Erik Bloomquist, Joseph Heled, Sebastian Hoehna, Denise Kuehnert, Philippe Lemey, Wai Lok Sibon Li, Gerton Lunter, Sidney Markowitz, Vladimir Minin, Michael Defoin Platel, Oliver Pybus, Tim Vaughan, Chieh-Hsi Wu, Walter Xie Thanks to: Roald Forsberg, Beth Shapiro and Korbinian Strimmer --- BEAGLE RESOURCES --- 0 : CPU Flags: PRECISION_SINGLE PRECISION_DOUBLE COMPUTATION_SYNCH EIGEN_REAL EIGEN_COMPLEX SCALING_MANUAL SCALING_AUTO SCALING_ALWAYS SCALERS_RAW SCALERS_LOG VECTOR_SSE VECTOR_NONE THREADING_NONE PROCESSOR_CPU FRAMEWORK_CPU 1 : Tesla V100-SXM2-16GB Global memory (MB): 16131 Clock speed (Ghz): 1.53 Number of cores: 10240 Flags: PRECISION_SINGLE PRECISION_DOUBLE COMPUTATION_SYNCH COMPUTATION_ASYNCH EIGEN_REAL EIGEN_COMPLEX SCALING_MANUAL SCALING_AUTO SCALING_ALWAYS SCALERS_RAW SCALERS_LOG VECTOR_NONE THREADING_NONE PROCESSOR_GPU FRAMEWORK_CUDA 2 : Tesla V100-SXM2-16GB Global memory (MB): 16131 Clock speed (Ghz): 1.53 Number of cores: 10240 Flags: PRECISION_SINGLE PRECISION_DOUBLE COMPUTATION_SYNCH COMPUTATION_ASYNCH EIGEN_REAL EIGEN_COMPLEX SCALING_MANUAL SCALING_AUTO SCALING_ALWAYS SCALERS_RAW SCALERS_LOG VECTOR_NONE THREADING_NONE PROCESSOR_GPU FRAMEWORK_CUDA 3 : Tesla V100-SXM2-16GB Global memory (MB): 16131 Clock speed (Ghz): 1.53 Number of cores: 10240 Flags: PRECISION_SINGLE PRECISION_DOUBLE COMPUTATION_SYNCH COMPUTATION_ASYNCH EIGEN_REAL EIGEN_COMPLEX SCALING_MANUAL SCALING_AUTO SCALING_ALWAYS SCALERS_RAW SCALERS_LOG VECTOR_NONE THREADING_NONE PROCESSOR_GPU FRAMEWORK_CUDA 4 : Tesla V100-SXM2-16GB Global memory (MB): 16131 Clock speed (Ghz): 1.53 Number of cores: 10240 Flags: PRECISION_SINGLE PRECISION_DOUBLE COMPUTATION_SYNCH COMPUTATION_ASYNCH EIGEN_REAL EIGEN_COMPLEX SCALING_MANUAL SCALING_AUTO SCALING_ALWAYS SCALERS_RAW SCALERS_LOG VECTOR_NONE THREADING_NONE PROCESSOR_GPU FRAMEWORK_CUDA -------------------