stderr.run7_copy_1.txt (4736 bytes)
File: infile.xml seed: 1651308830922 threads: 1
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Ignoring ambiguities in tree likelihood.
Ignoring character uncertainty in tree likelihood.
With 10264 unique site patterns.
Using rescaling scheme : dynamic
Operator Tuning #accept #reject Pr(m) Pr(acc|m)
ScaleOperator(YuleBirthRateScaler.t:31) 0.37168 1074723 3199456 0.02664 0.25145
ScaleOperator(YuleModelTreeScaler.t:31) 0.93883 422148 3850229 0.02664 0.09881 Try setting scaleFactor to about 0.969
ScaleOperator(YuleModelTreeRootScaler.t:31) 0.90953 386191 3888923 0.02664 0.09033 Try setting scaleFactor to about 0.954
Uniform(YuleModelUniformOperator.t:31) - 2464743 40262533 0.26643 0.05769
SubtreeSlide(YuleModelSubtreeSlide.t:31) 0.33686 13540145 7823043 0.13321 0.63381 Try increasing size to about 0.674
Exchange(YuleModelNarrow.t:31) - 51014 21310814 0.13321 0.00239
Exchange(YuleModelWide.t:31) - 257 4275627 0.02664 0.00006
WilsonBalding(YuleModelWilsonBalding.t:31) - 197 4275958 0.02664 0.00005
DeltaExchangeOperator(FrequenciesExchanger.s:31) 0.00910 27204 115413 0.00089 0.19075
ScaleOperator(RateACScaler.s:31) 0.84817 16603 125308 0.00089 0.11700
ScaleOperator(RateAGScaler.s:31) 0.86393 16262 127145 0.00089 0.11340
ScaleOperator(RateATScaler.s:31) 0.75708 17450 124355 0.00089 0.12306
ScaleOperator(RateCGScaler.s:31) 0.78102 18315 123635 0.00089 0.12902
ScaleOperator(RateGTScaler.s:31) 0.80359 13729 128265 0.00089 0.09669 Try setting scaleFactor to about 0.896
ScaleOperator(ucldMeanScaler.c:31) 0.92777 139223 1283495 0.00888 0.09786 Try setting scaleFactor to about 0.963
ScaleOperator(ucldStdevScaler.c:31) 0.94968 732859 3544272 0.02664 0.17134
IntRandomWalkOperator(CategoriesRandomWalk.c:31) - 5133422 9105807 0.08881 0.36051
SwapOperator(CategoriesSwapOperator.c:31) - 595271 13646161 0.08881 0.04180
UniformOperator(CategoriesUniform.c:31) - 1000438 13239457 0.08881 0.07026
UpDownOperator(relaxedUpDownOperator.c:31) 0.89654 785984 3483926 0.02664 0.18408
Tuning: The value of the operator's tuning parameter, or '-' if the operator can't be optimized.
#accept: The total number of times a proposal by this operator has been accepted.
#reject: The total number of times a proposal by this operator has been rejected.
Pr(m): The probability this operator is chosen in a step of the MCMC (i.e. the normalized weight).
Pr(acc|m): The acceptance probability (#accept as a fraction of the total proposals for this operator).
srun: Job step aborted: Waiting up to 32 seconds for job step to finish.
slurmstepd: error: *** STEP 11756182.0 ON exp-5-58 CANCELLED AT 2022-04-30T02:24:08 DUE TO TIME LIMIT ***