stderr.run16_copy_1.txt (4664 bytes)
File: infile.xml seed: 1651395058578 threads: 1
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Ignoring ambiguities in tree likelihood.
Ignoring character uncertainty in tree likelihood.
With 10264 unique site patterns.
Using rescaling scheme : dynamic
Operator Tuning #accept #reject Pr(m) Pr(acc|m)
ScaleOperator(YuleBirthRateScaler.t:31) 0.37895 772326 2209606 0.02664 0.25900
ScaleOperator(YuleModelTreeScaler.t:31) 0.93789 295663 2683817 0.02664 0.09923 Try setting scaleFactor to about 0.968
ScaleOperator(YuleModelTreeRootScaler.t:31) 0.91801 256965 2721452 0.02664 0.08628 Try setting scaleFactor to about 0.958
Uniform(YuleModelUniformOperator.t:31) - 1738118 28066576 0.26643 0.05832
SubtreeSlide(YuleModelSubtreeSlide.t:31) 2.53076 2741290 12157611 0.13321 0.18399
Exchange(YuleModelNarrow.t:31) - 38875 14862744 0.13321 0.00261
Exchange(YuleModelWide.t:31) - 190 2982104 0.02664 0.00006
WilsonBalding(YuleModelWilsonBalding.t:31) - 96 2979291 0.02664 0.00003
DeltaExchangeOperator(FrequenciesExchanger.s:31) 0.00804 22094 77277 0.00089 0.22234
ScaleOperator(RateACScaler.s:31) 0.86289 12955 86171 0.00089 0.13069
ScaleOperator(RateAGScaler.s:31) 0.86713 11411 87784 0.00089 0.11504
ScaleOperator(RateATScaler.s:31) 0.80076 15824 83732 0.00089 0.15895
ScaleOperator(RateCGScaler.s:31) 0.82178 16669 82653 0.00089 0.16783
ScaleOperator(RateGTScaler.s:31) 0.84581 13282 86364 0.00089 0.13329
ScaleOperator(ucldMeanScaler.c:31) 0.92347 91370 902113 0.00888 0.09197 Try setting scaleFactor to about 0.961
ScaleOperator(ucldStdevScaler.c:31) 0.92596 349268 2632658 0.02664 0.11713
IntRandomWalkOperator(CategoriesRandomWalk.c:31) - 3706675 6219227 0.08881 0.37343
SwapOperator(CategoriesSwapOperator.c:31) - 419658 9512784 0.08881 0.04225
UniformOperator(CategoriesUniform.c:31) - 714393 9219627 0.08881 0.07191
UpDownOperator(relaxedUpDownOperator.c:31) 0.88503 541278 2438009 0.02664 0.18168
Tuning: The value of the operator's tuning parameter, or '-' if the operator can't be optimized.
#accept: The total number of times a proposal by this operator has been accepted.
#reject: The total number of times a proposal by this operator has been rejected.
Pr(m): The probability this operator is chosen in a step of the MCMC (i.e. the normalized weight).
Pr(acc|m): The acceptance probability (#accept as a fraction of the total proposals for this operator).
srun: Job step aborted: Waiting up to 32 seconds for job step to finish.
slurmstepd: error: *** STEP 11772403.0 ON exp-4-60 CANCELLED AT 2022-05-01T02:21:13 DUE TO TIME LIMIT ***