stderr.run15_copy_4.txt (4663 bytes)
File: infile.xml seed: 1651391305888 threads: 1
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Ignoring ambiguities in tree likelihood.
Ignoring character uncertainty in tree likelihood.
With 10264 unique site patterns.
Using rescaling scheme : dynamic
Operator Tuning #accept #reject Pr(m) Pr(acc|m)
ScaleOperator(YuleBirthRateScaler.t:31) 0.38034 580140 1645632 0.02664 0.26065
ScaleOperator(YuleModelTreeScaler.t:31) 0.93574 212546 2011482 0.02664 0.09557 Try setting scaleFactor to about 0.967
ScaleOperator(YuleModelTreeRootScaler.t:31) 0.91556 184229 2038908 0.02664 0.08287 Try setting scaleFactor to about 0.957
Uniform(YuleModelUniformOperator.t:31) - 1296769 20951643 0.26643 0.05829
SubtreeSlide(YuleModelSubtreeSlide.t:31) 2.56215 2029694 9093258 0.13321 0.18248
Exchange(YuleModelNarrow.t:31) - 27449 11092299 0.13321 0.00247
Exchange(YuleModelWide.t:31) - 134 2226271 0.02664 0.00006
WilsonBalding(YuleModelWilsonBalding.t:31) - 66 2225063 0.02664 0.00003
DeltaExchangeOperator(FrequenciesExchanger.s:31) 0.00806 16304 57969 0.00089 0.21951
ScaleOperator(RateACScaler.s:31) 0.85962 9416 64580 0.00089 0.12725
ScaleOperator(RateAGScaler.s:31) 0.86340 8268 65605 0.00089 0.11192
ScaleOperator(RateATScaler.s:31) 0.79765 11561 62620 0.00089 0.15585
ScaleOperator(RateCGScaler.s:31) 0.81930 12278 62111 0.00089 0.16505
ScaleOperator(RateGTScaler.s:31) 0.84228 9652 64518 0.00089 0.13013
ScaleOperator(ucldMeanScaler.c:31) 0.92072 65346 676303 0.00888 0.08811 Try setting scaleFactor to about 0.96
ScaleOperator(ucldStdevScaler.c:31) 0.92377 254302 1971821 0.02664 0.11424
IntRandomWalkOperator(CategoriesRandomWalk.c:31) - 2758241 4648456 0.08881 0.37240
SwapOperator(CategoriesSwapOperator.c:31) - 312894 7103673 0.08881 0.04219
UniformOperator(CategoriesUniform.c:31) - 530377 6883405 0.08881 0.07154
UpDownOperator(relaxedUpDownOperator.c:31) 0.88353 402158 1822559 0.02664 0.18077
Tuning: The value of the operator's tuning parameter, or '-' if the operator can't be optimized.
#accept: The total number of times a proposal by this operator has been accepted.
#reject: The total number of times a proposal by this operator has been rejected.
Pr(m): The probability this operator is chosen in a step of the MCMC (i.e. the normalized weight).
Pr(acc|m): The acceptance probability (#accept as a fraction of the total proposals for this operator).
srun: Job step aborted: Waiting up to 32 seconds for job step to finish.
slurmstepd: error: *** STEP 11772087.0 ON exp-4-60 CANCELLED AT 2022-05-01T01:18:41 DUE TO TIME LIMIT ***