stderr.run15_copy_4.txt

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stderr.run15_copy_4.txt (4663 bytes)

File: infile.xml seed: 1651391305888 threads: 1
Loading package SNAPP v1.5.2
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  Ignoring ambiguities in tree likelihood.
  Ignoring character uncertainty in tree likelihood.
  With 10264 unique site patterns.
  Using rescaling scheme : dynamic
Operator                                             Tuning    #accept    #reject      Pr(m)  Pr(acc|m)
ScaleOperator(YuleBirthRateScaler.t:31)             0.38034     580140    1645632    0.02664    0.26065 
ScaleOperator(YuleModelTreeScaler.t:31)             0.93574     212546    2011482    0.02664    0.09557 Try setting scaleFactor to about 0.967
ScaleOperator(YuleModelTreeRootScaler.t:31)         0.91556     184229    2038908    0.02664    0.08287 Try setting scaleFactor to about 0.957
Uniform(YuleModelUniformOperator.t:31)                    -    1296769   20951643    0.26643    0.05829 
SubtreeSlide(YuleModelSubtreeSlide.t:31)            2.56215    2029694    9093258    0.13321    0.18248 
Exchange(YuleModelNarrow.t:31)                            -      27449   11092299    0.13321    0.00247 
Exchange(YuleModelWide.t:31)                              -        134    2226271    0.02664    0.00006 
WilsonBalding(YuleModelWilsonBalding.t:31)                -         66    2225063    0.02664    0.00003 
DeltaExchangeOperator(FrequenciesExchanger.s:31)    0.00806      16304      57969    0.00089    0.21951 
ScaleOperator(RateACScaler.s:31)                    0.85962       9416      64580    0.00089    0.12725 
ScaleOperator(RateAGScaler.s:31)                    0.86340       8268      65605    0.00089    0.11192 
ScaleOperator(RateATScaler.s:31)                    0.79765      11561      62620    0.00089    0.15585 
ScaleOperator(RateCGScaler.s:31)                    0.81930      12278      62111    0.00089    0.16505 
ScaleOperator(RateGTScaler.s:31)                    0.84228       9652      64518    0.00089    0.13013 
ScaleOperator(ucldMeanScaler.c:31)                  0.92072      65346     676303    0.00888    0.08811 Try setting scaleFactor to about 0.96
ScaleOperator(ucldStdevScaler.c:31)                 0.92377     254302    1971821    0.02664    0.11424 
IntRandomWalkOperator(CategoriesRandomWalk.c:31)          -    2758241    4648456    0.08881    0.37240 
SwapOperator(CategoriesSwapOperator.c:31)                 -     312894    7103673    0.08881    0.04219 
UniformOperator(CategoriesUniform.c:31)                   -     530377    6883405    0.08881    0.07154 
UpDownOperator(relaxedUpDownOperator.c:31)          0.88353     402158    1822559    0.02664    0.18077 

     Tuning: The value of the operator's tuning parameter, or '-' if the operator can't be optimized.
    #accept: The total number of times a proposal by this operator has been accepted.
    #reject: The total number of times a proposal by this operator has been rejected.
      Pr(m): The probability this operator is chosen in a step of the MCMC (i.e. the normalized weight).
  Pr(acc|m): The acceptance probability (#accept as a fraction of the total proposals for this operator).

srun: Job step aborted: Waiting up to 32 seconds for job step to finish.
slurmstepd: error: *** STEP 11772087.0 ON exp-4-60 CANCELLED AT 2022-05-01T01:18:41 DUE TO TIME LIMIT ***