stderr.run10_copy_2.txt (4549 bytes)
File: infile.xml seed: 1651324426721 threads: 1
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Ignoring ambiguities in tree likelihood.
Ignoring character uncertainty in tree likelihood.
With 10264 unique site patterns.
Using rescaling scheme : dynamic
Operator Tuning #accept #reject Pr(m) Pr(acc|m)
ScaleOperator(YuleBirthRateScaler.t:31) 0.37047 1609910 4832952 0.02664 0.24987
ScaleOperator(YuleModelTreeScaler.t:31) 0.94159 671200 5771621 0.02664 0.10418
ScaleOperator(YuleModelTreeRootScaler.t:31) 0.91302 571613 5872860 0.02664 0.08870 Try setting scaleFactor to about 0.956
Uniform(YuleModelUniformOperator.t:31) - 3742457 60678184 0.26643 0.05809
SubtreeSlide(YuleModelSubtreeSlide.t:31) 0.39669 20385272 11825249 0.13321 0.63288 Try increasing size to about 0.793
Exchange(YuleModelNarrow.t:31) - 81678 32131665 0.13321 0.00254
Exchange(YuleModelWide.t:31) - 414 6446898 0.02664 0.00006
WilsonBalding(YuleModelWilsonBalding.t:31) - 289 6445440 0.02664 0.00004
DeltaExchangeOperator(FrequenciesExchanger.s:31) 0.00898 41848 173304 0.00089 0.19450
ScaleOperator(RateACScaler.s:31) 0.85354 26200 188359 0.00089 0.12211
ScaleOperator(RateAGScaler.s:31) 0.86885 25726 189849 0.00089 0.11934
ScaleOperator(RateATScaler.s:31) 0.76431 27504 186697 0.00089 0.12840
ScaleOperator(RateCGScaler.s:31) 0.78745 28607 185719 0.00089 0.13347
ScaleOperator(RateGTScaler.s:31) 0.81137 21929 192412 0.00089 0.10231
ScaleOperator(ucldMeanScaler.c:31) 0.93104 221010 1925941 0.00888 0.10294
ScaleOperator(ucldStdevScaler.c:31) 0.95050 1152524 5294235 0.02664 0.17878
IntRandomWalkOperator(CategoriesRandomWalk.c:31) - 7832480 13634462 0.08881 0.36486
SwapOperator(CategoriesSwapOperator.c:31) - 902345 20570325 0.08881 0.04202
UniformOperator(CategoriesUniform.c:31) - 1524149 19948150 0.08881 0.07098
UpDownOperator(relaxedUpDownOperator.c:31) 0.89812 1204379 5234144 0.02664 0.18706
Tuning: The value of the operator's tuning parameter, or '-' if the operator can't be optimized.
#accept: The total number of times a proposal by this operator has been accepted.
#reject: The total number of times a proposal by this operator has been rejected.
Pr(m): The probability this operator is chosen in a step of the MCMC (i.e. the normalized weight).
Pr(acc|m): The acceptance probability (#accept as a fraction of the total proposals for this operator).
slurmstepd: error: *** STEP 11758554.0 ON exp-5-58 CANCELLED AT 2022-04-30T06:43:58 DUE TO TIME LIMIT ***