stderr.run13_copy_3.txt

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stderr.run13_copy_3.txt (4667 bytes)

File: infile.xml seed: 1651375137968 threads: 1
Loading package SNAPP v1.5.2
Loading package BDSKY v1.4.7
Loading package NS v1.1.0
Loading package substBMA v1.2.3
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  Ignoring ambiguities in tree likelihood.
  Ignoring character uncertainty in tree likelihood.
  With 10264 unique site patterns.
  Using rescaling scheme : dynamic
Operator                                             Tuning    #accept    #reject      Pr(m)  Pr(acc|m)
ScaleOperator(YuleBirthRateScaler.t:31)             0.38652     198678     542834    0.02664    0.26794 
ScaleOperator(YuleModelTreeScaler.t:31)             0.92632      61587     679443    0.02664    0.08311 Try setting scaleFactor to about 0.962
ScaleOperator(YuleModelTreeRootScaler.t:31)         0.90446      56250     683762    0.02664    0.07601 Try setting scaleFactor to about 0.951
Uniform(YuleModelUniformOperator.t:31)                    -     427451    6977093    0.26643    0.05773 
SubtreeSlide(YuleModelSubtreeSlide.t:31)            2.71232     697026    3005468    0.13321    0.18826 
Exchange(YuleModelNarrow.t:31)                            -       8780    3694232    0.13321    0.00237 
Exchange(YuleModelWide.t:31)                              -         47     741684    0.02664    0.00006 
WilsonBalding(YuleModelWilsonBalding.t:31)                -         15     740189    0.02664    0.00002 
DeltaExchangeOperator(FrequenciesExchanger.s:31)    0.00817       5405      19441    0.00089    0.21754 
ScaleOperator(RateACScaler.s:31)                    0.84555       2830      21917    0.00089    0.11436 
ScaleOperator(RateAGScaler.s:31)                    0.84754       2426      22081    0.00089    0.09899 Try setting scaleFactor to about 0.921
ScaleOperator(RateATScaler.s:31)                    0.78467       3522      21302    0.00089    0.14188 
ScaleOperator(RateCGScaler.s:31)                    0.80868       3766      21129    0.00089    0.15128 
ScaleOperator(RateGTScaler.s:31)                    0.82738       2890      21714    0.00089    0.11746 
ScaleOperator(ucldMeanScaler.c:31)                  0.90870      18448     228266    0.00888    0.07477 Try setting scaleFactor to about 0.953
ScaleOperator(ucldStdevScaler.c:31)                 0.91432      72622     668237    0.02664    0.09802 Try setting scaleFactor to about 0.956
IntRandomWalkOperator(CategoriesRandomWalk.c:31)          -     928912    1538637    0.08881    0.37645 
SwapOperator(CategoriesSwapOperator.c:31)                 -     105083    2363668    0.08881    0.04257 
UniformOperator(CategoriesUniform.c:31)                   -     176949    2290661    0.08881    0.07171 
UpDownOperator(relaxedUpDownOperator.c:31)          0.87693     140574     599981    0.02664    0.18982 

     Tuning: The value of the operator's tuning parameter, or '-' if the operator can't be optimized.
    #accept: The total number of times a proposal by this operator has been accepted.
    #reject: The total number of times a proposal by this operator has been rejected.
      Pr(m): The probability this operator is chosen in a step of the MCMC (i.e. the normalized weight).
  Pr(acc|m): The acceptance probability (#accept as a fraction of the total proposals for this operator).

slurmstepd: error: *** STEP 11768376.0 ON exp-2-60 CANCELLED AT 2022-04-30T20:49:20 DUE TO TIME LIMIT ***